fhModels: Building Flow Histogram Models

In plantarum/flowPloidy: Analyze flow cytometer data to determine sample ploidy

Building Flow Histogram Models

Description

Functions for assembling non-linear regression models for FlowHist objects.

Usage

addComponents(fh)

dropComponents(fh, components)

setLimits(fh)

makeModel(fh, env = parent.frame())

Arguments

fh	a FlowHist object
components	character, a vector of ModelComponent names.
env	an R environment. Don't change this, it's R magic to keep the appropriate environment in scope when building our model.

Details

addComponents examines the model components in fhComponents and includes the ones that pass their includeTest.

dropComponents removes a component from the FlowHist model

setLimits collates the parameter limits for the model components included in a FlowHist object. (could be called automatically from addComponents, as it already is from dropComponents?)

makeModel creates a model out of all the included components.

Value

The updated FlowHist object.

Author(s)

Tyler Smith

plantarum/flowPloidy documentation built on March 25, 2023, 1:37 a.m.