isobaric_edata: Isobaric Peptide Expression Data (e_data)
In pmartR/pmartRdata: Example Data for pmartR Package
isobaric_edata R Documentation
Isobaric Peptide Expression Data (e_data)
Description
These data are part of Experiment 1 (isobaric labeled proteomics, lipidomics,
and RNAseq data), and consist of a subset of de-identified data from a
multi-omic study . These data consist of samples from three different strains
of a virus, plus pooled reference samples. Since this is only a subset of
data from this study, the number of samples is not identical across TMT
plexes, and the TMT plex names are not sequential.
Format
A data frame with 215,220 rows (peptides) and 51 columns (peptide
identifier and samples, including one pooled reference sample for each TMT
plex):
- Peptide
Peptide name
- StrainA*
Columns for Strain A samples
- StrainB*
Columns for Strain B samples
- StrainC*
Columns for Strain C samples
- Pool_Plex*
Columns for pooled reference samples, where the number in
the sample name corresponds to the TMT plex on which the pooled reference
sample was run
pmartR/pmartRdata documentation built on Jan. 13, 2023, 3:52 a.m.
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| isobaric_edata | R Documentation |
Isobaric Peptide Expression Data (e_data)
Description
These data are part of Experiment 1 (isobaric labeled proteomics, lipidomics, and RNAseq data), and consist of a subset of de-identified data from a multi-omic study . These data consist of samples from three different strains of a virus, plus pooled reference samples. Since this is only a subset of data from this study, the number of samples is not identical across TMT plexes, and the TMT plex names are not sequential.
Format
A data frame with 215,220 rows (peptides) and 51 columns (peptide identifier and samples, including one pooled reference sample for each TMT plex):
- Peptide
Peptide name
- StrainA*
Columns for Strain A samples
- StrainB*
Columns for Strain B samples
- StrainC*
Columns for Strain C samples
- Pool_Plex*
Columns for pooled reference samples, where the number in the sample name corresponds to the TMT plex on which the pooled reference sample was run
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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