isobaric_object: Isobaric Data Object of Class isobaricpepData
In pmartR/pmartRdata: Example Data for pmartR Package
isobaric_object R Documentation
Isobaric Data Object of Class isobaricpepData
Description
These data are part of Experiment 1 (isobaric labeled proteomics, lipidomics,
and RNAseq data), and consist of a subset of de-identified data from a
multi-omic study . These data consist of samples from three different strains
of a virus, plus pooled reference samples. Since this is only a subset of
data from this study, the number of samples is not identical across TMT
plexes, and the TMT plex names are not sequential.
Format
A isobaricpepData object (see
as.isobaricpepData for details)
- e_data
a p \times n + 1 data frame of expression data, where
p is the number of peptides observed and n is the number of
samples. Each row corresponds to data for each peptide
- f_data
a data frame with n rows. Each row corresponds to a
sample with one column giving the unique sample identifiers found in e_data
column names and other columns providing qualitative and/or quantitative
traits of each sample.
- e_meta
a data frame containing biomolecule metadata
pmartR/pmartRdata documentation built on Jan. 13, 2023, 3:52 a.m.
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| isobaric_object | R Documentation |
Isobaric Data Object of Class isobaricpepData
Description
These data are part of Experiment 1 (isobaric labeled proteomics, lipidomics, and RNAseq data), and consist of a subset of de-identified data from a multi-omic study . These data consist of samples from three different strains of a virus, plus pooled reference samples. Since this is only a subset of data from this study, the number of samples is not identical across TMT plexes, and the TMT plex names are not sequential.
Format
A isobaricpepData object (see
as.isobaricpepData for details)
- e_data
a p \times n + 1 data frame of expression data, where p is the number of peptides observed and n is the number of samples. Each row corresponds to data for each peptide
- f_data
a data frame with n rows. Each row corresponds to a sample with one column giving the unique sample identifiers found in e_data column names and other columns providing qualitative and/or quantitative traits of each sample.
- e_meta
a data frame containing biomolecule metadata
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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