An S3 object of class pepData (see
as.pepData for details)
A pepData object
a p \times n + 1 data.frame of expression data, where p is the number of peptides observed and n is the number of samples. Each row corresponds to data for each peptide
a data.frame with n rows. Each row corresponds to a sample with one column giving the unique sample identifiers found in e_data column names and other columns providing qualitative and/or quantitative traits of each sample.
an optional data.frame with p rows. Each row corresponds to a peptide with one column giving peptide names (must be named the same as the column in
e_data) and other columns giving meta information (e.g. mappings of peptides to proteins).
See details of
pmartRdata for relevant grant numbers. Data is also available on MassIVE (massive.ucsd.edu) with dataset id MSV000079152.
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