pep_techrep_fdata: Peptide-level Technical Replicate Sample Metadata (f_data)
In pmartR/pmartRdata: Example Data for pmartR Package
pep_techrep_fdata R Documentation
Peptide-level Technical Replicate Sample Metadata (f_data)
Description
A dataset containing the technical replicate metadata, including technical
replicate sample assignment variable.
Format
A data.frame with 64 rows (samples) and 4 columns:
- RunID
LC-MS run identifier (matches column headers in pep_edata)
- FACTOR
Character string indicating either regular weight (RW), or
obese (OB) groups
- DILUTION
Character string indicating dilution of mouse plasma to
Shewanella Oneidensis MR-1
- TECH_REP
Character string indicating which technical replicates
belong to the same biological sample
References
Webb-Robertson BJ, Matzke MM, Datta S, Payne SH, Kang J, Bramer
LM, Nicora CD, Shukla AK, Metz TO, Rodland KD, Smith RD (2014),
Bayesian proteoform modeling improves protein quantification of
global proteomic measurements. Molecular & cellular proteomics 13 (12),
3639-46.
pmartR/pmartRdata documentation built on Jan. 13, 2023, 3:52 a.m.
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| pep_techrep_fdata | R Documentation |
Peptide-level Technical Replicate Sample Metadata (f_data)
Description
A dataset containing the technical replicate metadata, including technical replicate sample assignment variable.
Format
A data.frame with 64 rows (samples) and 4 columns:
- RunID
LC-MS run identifier (matches column headers in pep_edata)
- FACTOR
Character string indicating either regular weight (RW), or obese (OB) groups
- DILUTION
Character string indicating dilution of mouse plasma to Shewanella Oneidensis MR-1
- TECH_REP
Character string indicating which technical replicates belong to the same biological sample
References
Webb-Robertson BJ, Matzke MM, Datta S, Payne SH, Kang J, Bramer LM, Nicora CD, Shukla AK, Metz TO, Rodland KD, Smith RD (2014), Bayesian proteoform modeling improves protein quantification of global proteomic measurements. Molecular & cellular proteomics 13 (12), 3639-46.
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