pro_emeta: Protein-level Biomolecule Metadata (e_meta)

In pmartR/pmartRdata: Example Data for pmartR Package

Protein-level Biomolecule Metadata (e_meta)

Description

These data are part of Experiment 2 (metabolomics, unlabeled peptide and associated protein data). A dataset containing the protein metadata (resulting from the roll-up of peptides to proteins within pmartR).

Format

A data.frame with 2,982 rows (proteins) and 3 columns (protein identifier and meta data):

RazorProtein

Protein identifier that matches RazorProtein column in pep_edata

peps_per_pro

Integer count of number of peptides for each protein; automatically calculated in protein_quant function in pmartR

n_peps_used

Integer count of the number of peptides used when rolling up to the protein level; automatically calculated in protein_quant function in pmartR

pmartR/pmartRdata documentation built on Jan. 13, 2023, 3:52 a.m.