ExportROIPeaks: ExportROIPeaks.
In prafols/rMSIproc: MSI Processing in C++
View source: R/ExportROISummary.R
Description
Export a peak matrix summary as CSV files.
An average and standard deviation of each ROI is calculated for intensity, area and SNR peak matrices.
The results are stored as tables in CSV files.
Usage
1
ExportROIPeaks(pkmat, idlist, out_path = getwd(), normalization = NULL)
Arguments
pkmat
an rMSIproc peak matrix object.
idlist
a list of pixel ID's in each ROI using the format returned by ExportROIAverages.
out_path
disk path where the results will be stored.
normalization
a text string with the name of desired normalization to apply at output files.
prafols/rMSIproc documentation built on Dec. 12, 2021, 7:31 p.m.
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View source: R/ExportROISummary.R
Description
Export a peak matrix summary as CSV files. An average and standard deviation of each ROI is calculated for intensity, area and SNR peak matrices. The results are stored as tables in CSV files.
Usage
1 | ExportROIPeaks(pkmat, idlist, out_path = getwd(), normalization = NULL)
|
Arguments
pkmat |
an rMSIproc peak matrix object. |
idlist |
a list of pixel ID's in each ROI using the format returned by ExportROIAverages. |
out_path |
disk path where the results will be stored. |
normalization |
a text string with the name of desired normalization to apply at output files. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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