import_imzMLpeakList: import_imzMLpeakList.

Description Usage Arguments Value

View source: R/peakList2imzML.R

Description

import a processed imzML file to a rMSIproc peak list object.

Usage

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import_imzMLpeakList(
  imzML_File,
  ibd_File = paste(sub("\\.[^.]*$", "", imzML_File), ".ibd", sep = "")
)

Arguments

imzML_File

full path to .imzML file.

ibd_File

path to the binary file (default the same as imzML file but with .ibd extension)

Value

a list containing: the peakList, the rMSI formated position matrix and the pixel size.


prafols/rMSIproc documentation built on Dec. 12, 2021, 7:31 p.m.