InternalReferenceSpectrum: InternalReferenceSpectrum.
In prafols/rMSIproc: MSI Processing in C++
Description
Usage
Arguments
Value
View source: R/ReferenceSpectrum.R
Description
Calculates the dataset reference spectrum to use in label free alignment.
The reference spectrum is the spectrum in the dataset with the best correlation to average spectrum and with high TIC.
Usage
1
InternalReferenceSpectrum(img, reference = img$mean)
Arguments
img
MSI image to calculate internal reference spectrum.
reference
the spectrum to use as reference for correlations.
Value
a list with the intensity vector corresponding to the reference spectrum, the score and the pixel ID selected as reference.
prafols/rMSIproc documentation built on Dec. 12, 2021, 7:31 p.m.
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Description Usage Arguments Value
View source: R/ReferenceSpectrum.R
Description
Calculates the dataset reference spectrum to use in label free alignment. The reference spectrum is the spectrum in the dataset with the best correlation to average spectrum and with high TIC.
Usage
1 | InternalReferenceSpectrum(img, reference = img$mean)
|
Arguments
img |
MSI image to calculate internal reference spectrum. |
reference |
the spectrum to use as reference for correlations. |
Value
a list with the intensity vector corresponding to the reference spectrum, the score and the pixel ID selected as reference.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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