Files in prafols/rMSIproc

MSI Processing in C++

.Rbuildignore

.gitignore

DESCRIPTION

LICENSE.txt

NAMESPACE

R/AverageSpectrum.R R/DataImportAndProcessWizard.R R/DetectPeaks.R R/ExportROISummary.R R/LoadStorePeakMat.R R/Process.R R/RcppExports.R R/ReferenceSpectrum.R R/Smoothing.R R/adductAnnotation.R R/annotation.R R/api.R R/fileBrowseWidget.R R/ggplot_additional_graphics.R R/isotopeAnnotation.R R/mass_calibration.R R/peakList2imzML.R R/plotPeakMatrix.R R/rmsicdataio.R R/zzz.R README.md man/ArrangeMultipleImg2Plot.Rd man/AverageSpectrum_rMSIproc.Rd man/CPeakList2PeakMatrix.Rd man/CalibrateImage.Rd man/CalibrationWindow.Rd man/DeisotopingOutputFormat.Rd man/DetectPeaks.Rd man/DetectPeaks_C.Rd man/ExportROIAverages.Rd man/ExportROIAveragesMultiple.Rd man/ExportROIPeaks.Rd man/FormatPeakMatrix.Rd man/InternalReferenceSpectrum.Rd man/InternalReferenceSpectrumMultipleDatasets.Rd man/LoadPeakMatrix.Rd man/LoadPeakMatrixC.Rd man/MergePeakMatrices.Rd man/MergeTwoMassAxis.Rd man/MergerMSIDataSets.Rd man/NoiseEstimationFFTCosWin.Rd man/NoiseEstimationFFTCosWinMat.Rd man/NoiseEstimationFFTExpWin.Rd man/NoiseEstimationFFTExpWinMat.Rd man/PeakList2PeakMatrix.Rd man/ProcessImage.Rd man/ProcessWizard.Rd man/SaveProcessingParams.Rd man/Smoothing.Rd man/Smoothing_SavitzkyGolay.Rd man/StorePeakMatrix.Rd man/StorePeakMatrixC.Rd man/TestAreaWindow.Rd man/TestHanningWindow.Rd man/TestPeakInterpolation_C.Rd man/adductAnnotation.Rd man/buildImgIdVectorFromPeakMatrix.Rd man/calMzAxis.Rd man/chemFormula2Expression.Rd man/export_imzMLpeakList.Rd man/getImgIdsFromPeakMatrixRows.Rd man/getPeakMatrixRowsFromImgIds.Rd man/getrMSIdataInfo.Rd man/getrMSIdataInfoMultipleDataSets.Rd man/hello.Rd man/import_imzMLpeakList.Rd man/isotopeAnnotation.Rd man/loadDataCube.Rd man/plot.rMSIprocPeakMatrix.Rd man/plotClusterImage.Rd man/plotClusterImageG.Rd man/plotMassDriftComparedG.Rd man/plotMassDriftG.Rd man/plotMassDriftImageComparedG.Rd man/plotMassDriftImageG.Rd man/plotPeakImage.Rd man/plotPeakImageG.Rd man/plotValuesImage.Rd man/plotValuesImageG.Rd man/print.rMSIprocPeakMatrix.Rd man/printrMSIdataInfo.Rd man/rMSIannotation.Rd man/rMSIproc.Rd man/rcpp_hello.Rd man/sub-.rMSIprocPeakMatrix.Rd man/summary.rMSIprocPeakMatrix.Rd man/theme_black.Rd

rMSIproc.Rproj

rMSIproc_0.3.pdf

src/Makevars

src/Makevars.win

src/RcppExports.cpp

src/adductannotation.cpp

src/adductannotation.h

src/fftw3_win/fftw3.f

src/fftw3_win/fftw3.f03

src/fftw3_win/fftw3.h

src/fftw3_win/fftw3l.f03

src/fftw3_win/fftw3q.f03

src/fftw3_win/lib32/libfftw3-3.dll

src/fftw3_win/lib64/libfftw3-3.dll

src/install.libs.R

src/isotopeannotation.cpp

src/isotopeannotation.h

src/labelfreealign.cpp

src/labelfreealign.h

src/mergeTwoMassAxes.cpp

src/mtaverage.cpp

src/mtaverage.h

src/mtbitdepthreduction.cpp

src/mtbitdepthreduction.h

src/mtlabelfreealign.cpp

src/mtlabelfreealign.h

src/mtpeakpicking.cpp

src/mtpeakpicking.h

src/mtreplacezeropeaks.cpp

src/mtreplacezeropeaks.h

src/mtsmoothing.cpp

src/mtsmoothing.h

src/noiseestimation.cpp

src/noiseestimation.h

src/peakbinning.cpp

src/peakbinning.h

src/peakmatrixio.cpp

src/peakmatrixio.h

src/peakpicking.cpp

src/peakpicking.h

src/progressbar.cpp

src/progressbar.h

src/rmsicdataio.cpp

src/rmsicdataio.h

src/smoothing.cpp

src/smoothing.h

src/threadingmsiproc.cpp

src/threadingmsiproc.h

tutorial/rMSI_rMSIproc_tutorial.pdf

prafols/rMSIproc documentation built on Dec. 12, 2021, 7:31 p.m.