Man pages for prafols/rMSIproc
MSI Processing in C++

adductAnnotationadductAnnotation
ArrangeMultipleImg2PlotArrangeMultipleImg2Plot
AverageSpectrum_rMSIprocAverageSpectrum_rMSIproc.
buildImgIdVectorFromPeakMatrixbuildImgIdVectorFromPeakMatrix.
CalibrateImageApply a new mass axis to a complete image. A GUI to calibrate...
CalibrationWindowCalibrationWindow.
calMzAxiscalMzAxis.
chemFormula2ExpressionchemFormula2Expression.
CPeakList2PeakMatrixCPeakList2PeakMatrix.
DeisotopingOutputFormatDeisotopingOutputFormat
DetectPeaksDetectPeaks'
DetectPeaks_CDetectPeaks_C.
export_imzMLpeakListexport_imzMLpeakList.
ExportROIAveragesExportROIAverages.
ExportROIAveragesMultipleExportROIAveragesMultiple.
ExportROIPeaksExportROIPeaks.
FormatPeakMatrixFormatPeakMatrix. Formats a C style peak matrix generated by...
getImgIdsFromPeakMatrixRowsgetImgIdsFromPeakMatrixRows.
getPeakMatrixRowsFromImgIdsgetPeakMatrixRowsFromImgIds.
getrMSIdataInfogetrMSIdataInfo.
getrMSIdataInfoMultipleDataSetsgetrMSIdataInfoMultipleDataSets.
helloHello, World!
import_imzMLpeakListimport_imzMLpeakList.
InternalReferenceSpectrumInternalReferenceSpectrum.
InternalReferenceSpectrumMultipleDatasetsInternalReferenceSpectrumMultipleDatasets.
isotopeAnnotationisotopeAnnotation
loadDataCubeloadDataCube.
LoadPeakMatrixLoadPeakMatrix.
LoadPeakMatrixCLoadPeakMatrix.
MergePeakMatricesMergePeakMatrices.
MergerMSIDataSetsMergerMSIDataSets.
MergeTwoMassAxisMergeTwoMassAxis.
NoiseEstimationFFTCosWinNoiseEstimationFFTCosWin.
NoiseEstimationFFTCosWinMatNoiseEstimationFFTCosWinMat.
NoiseEstimationFFTExpWinNoiseEstimationFFTExpWin.
NoiseEstimationFFTExpWinMatNoiseEstimationFFTExpWinMat.
PeakList2PeakMatrixPeakList2PeakMatrix.
plotClusterImageplotClusterImage.
plotClusterImageGplotClusterImageG.
plotMassDriftComparedGplotMassDriftCompared.
plotMassDriftGplotMassDriftG.
plotMassDriftImageComparedGplotMassDriftImageComparedG.
plotMassDriftImageGplotMassDriftImageG.
plotPeakImageplotPeakImage.
plotPeakImageGplotPeakImageG.
plot.rMSIprocPeakMatrixGeneric plot method for rMSIproc peak matrix.
plotValuesImageplotValuesImage
plotValuesImageGplotValuesImageG.
printrMSIdataInfoprintrMSIdataInfo.
print.rMSIprocPeakMatrixDisplays a summary of a peak matrix.
ProcessImageProcessImage.
ProcessWizardProcessWizard.
rcpp_helloHello, Rcpp!
rMSIannotationrMSIannotation
rMSIprocrMSIproc
SaveProcessingParamsSaveProcessingParams.
SmoothingSmoothing.
Smoothing_SavitzkyGolaySmoothing_SavitzkyGolay.
StorePeakMatrixStorePeakMatrix.
StorePeakMatrixCStorePeakMatrix.
sub-.rMSIprocPeakMatrixSubsetting operator for rMSIproc peak matrices.
summary.rMSIprocPeakMatrixDisplays a summary of a peak matrix.
TestAreaWindowTestAreaWindow.
TestHanningWindowTestHanningWindow.
TestPeakInterpolation_CTestPeakInterpolation_C.
theme_blacktheme_black. custom ggplot theme to display ion map images...
prafols/rMSIproc documentation built on Dec. 12, 2021, 7:31 p.m.