calcCoverage: Calculate coverage
In qiuxintao101/scCNV: What the Package Does (One Line, Title Case)
View source: R/supp_functions.R
calcCoverage R Documentation
Calculate coverage
Description
This fuction calculate coverage by multiplying read counts by the average
fragment length and dividing by the length of the feature
Usage
calcCoverage(data, df, avg_frag_length)
Arguments
data
Matrix of copy numbers
df
dataframe containing a feature lengths column
avg_frag_length
Average length of a genomic framgnet
Value
coverage matrix
qiuxintao101/scCNV documentation built on July 31, 2022, 2:10 p.m.
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View source: R/supp_functions.R
| calcCoverage | R Documentation |
Calculate coverage
Description
This fuction calculate coverage by multiplying read counts by the average fragment length and dividing by the length of the feature
Usage
calcCoverage(data, df, avg_frag_length)
Arguments
data |
Matrix of copy numbers |
df |
dataframe containing a feature lengths column |
avg_frag_length |
Average length of a genomic framgnet |
Value
coverage matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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