get.parents: simple lineage retrieval
In raim/ncbitax: Simple base R parser for NCBI Taxonomy
Description
Usage
Arguments
Examples
Description
returns a simple lineage vector
Usage
1
get.parents(id, tax, skip = NULL)
Arguments
id
a taxon ID
tax
NCBI taxonomy object
skip
edges table to skip: if the node id is already present,
the recursive function is not called
Examples
1
2
get.parents("1148", tax)
get.parents("1140", tax)
raim/ncbitax documentation built on Aug. 6, 2020, 7:29 a.m.
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Description Usage Arguments Examples
Description
returns a simple lineage vector
Usage
1 | get.parents(id, tax, skip = NULL)
|
Arguments
id |
a taxon ID |
tax |
NCBI taxonomy object |
skip |
edges table to skip: if the node |
Examples
1 2 | get.parents("1148", tax)
get.parents("1140", tax)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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