Description Usage Arguments Examples
convert NCBI taxonomy sub trees to newick format
1 2 |
ids |
vector of taxon IDs |
tax |
NCBI taxonomy object |
names |
replace taxon IDs with names |
full |
if |
ranks |
add rank information for nodes |
verb |
print progress messages |
dbug |
print debug messages |
1 | new <- tax2newick(ids=c("1148","1140"), tax=tax, names=TRUE)
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