plotOverlapsLegend | R Documentation |
plotOverlaps
plotsplot a legend for plotOverlaps
plots
plotOverlapsLegend(
p.min = 1e-10,
p.txt = 1e-05,
type = 1,
round = 0,
show.text = TRUE,
text,
l = 5,
n = 100,
col,
dir = 1,
labels = TRUE,
...
)
p.min |
significance cutoff, p-values equal or smaller to this cutoff will appear black (one-sided tests) or red/blue (two-sided tests) |
p.txt |
p-value cutoff for showing overlap numbers as white instead of black text |
type |
1-sided or 2-sided tests |
round |
round parameter for numeric text |
show.text |
show log10(p) as text fields (to indicated text p-value cutoff) |
text |
optional single character to be shown as black/white text
in the legend (e.g. |
l |
number of fields to show in plot |
n |
number of color shades between |
col |
color ramp, default are grey values (one-sided) or
red (above) and blue (below) for two-sided tests, length of
this vector overrules parameter |
dir |
horizontal (1) or vertical (2) orientation |
labels |
add axis labels |
... |
further arguments to |
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