range2nt: calculates letter frequences in ranges of strings
In raim/segmenTools: Tools for Functional Genome Exploration
range2nt R Documentation
calculates letter frequences in ranges of strings
Description
calculates letter frequences in ranges of strings, e.g.,
nucleotide sequences. The input is a sequence object
as returned by readFASTA.
Usage
range2nt(seq, ranges, coors = c(chr = "chr", start = "start", end = "end"))
Arguments
seq
a sequence object as returned by readFASTA
ranges
a table provided ranges in each string
coors
coordinate names in ranges table
raim/segmenTools documentation built on April 25, 2024, 10:14 a.m.
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| range2nt | R Documentation |
calculates letter frequences in ranges of strings
Description
calculates letter frequences in ranges of strings, e.g.,
nucleotide sequences. The input is a sequence object
as returned by readFASTA.
Usage
range2nt(seq, ranges, coors = c(chr = "chr", start = "start", end = "end"))
Arguments
seq |
a sequence object as returned by |
ranges |
a table provided ranges in each string |
coors |
coordinate names in ranges table |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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