segmentUpstream: get upstream or downstream range
In raim/segmenTools: Tools for Functional Genome Exploration

segmentUpstream

R Documentation

get upstream or downstream range

Description

Returns upstream (upstream<0) or downstream (upstream>0) ranges of the passed features. The reported ranges start at the start or end coordinates, in a strand-specific way.

Usage

segmentUpstream(x, upstream, reverse = c("-1", "-"))

Arguments

`x`	genomic interval (segments) table.
`upstream`	usptream (<0) or downstream (>0) range of the intervals in `x`.
`reverse`	reverse strand identifiers, all others are considered to stem from the forward strand.