selected: get clustering ID

In raim/segmenTools: Tools for Functional Genome Exploration

get clustering ID

Description

get the column name or index of the selected clustering from a ‘clustering’ object from segmenTier's clustering wrappers clusterTimeseries) and flowclusterTimeseries). The retuned integer or string allows to interface data for this clustering from the ‘clustering’ object.

Usage

selected(cset, K, name = TRUE)

Arguments

cset	a structure of class 'clustering' as returned by segmenTier's clusterTimeseries
K	cluster number; if missing the ‘selected’ clustering will be taken
name	logical, if TRUE the name of of the selected clustering will be returned, if FALSE its index number

raim/segmenTools documentation built on Feb. 16, 2025, 10:40 p.m.