switchStrand: switches the strand information (reverse<->forward) of...

In raim/segmenTools: Tools for Functional Genome Exploration

switches the strand information (reverse<->forward) of genomic features with continuously indexed chromosome coordinates

Description

switches the strand information (reverse<->forward) of genomic features with continuously indexed chromosome coordinates

Usage

switchStrand(features, chrS, cols = c("start", "end", "coor"))

Arguments

features	genomic features with continuously indexed chromosome coordinates
chrS	the chromosome index, indicating the start position of each chromosome in the continuous index, derived from chromosome length information
cols	names of the columns holding the continuous index

raim/segmenTools documentation built on April 25, 2024, 10:14 a.m.