mouse_bm: Mouse gene symbols and positions

In rhondabacher/methylscaper: Visualization of Methylation Data

Mouse gene symbols and positions

Description

library(biomaRt) #v2.44.4 ensembl <- useMart("ensembl") # GRCm39 ensembl <- useDataset("mmusculus_gene_ensembl",mart=ensembl) my_chr <- c(1:19, 'M', 'X', 'Y') mouse_bm <- getBM(attributes=c('chromosome_name', 'start_position', 'end_position', 'mgi_symbol'), filters = 'chromosome_name', values = my_chr, mart=ensembl)

Usage

data(mouse_bm)

Format

An object of class data.frame with 55365 rows and 4 columns.

rhondabacher/methylscaper documentation built on Oct. 10, 2024, 8:18 a.m.