mouse_bm: Mouse gene symbols and positions
In rhondabacher/methylscaper: Visualization of Methylation Data
mouse_bm R Documentation
Mouse gene symbols and positions
Description
library(biomaRt) #v2.44.4
ensembl <- useMart("ensembl") # GRCm39
ensembl <- useDataset("mmusculus_gene_ensembl",mart=ensembl)
my_chr <- c(1:19, 'M', 'X', 'Y')
mouse_bm <- getBM(attributes=c('chromosome_name', 'start_position', 'end_position', 'mgi_symbol'),
filters = 'chromosome_name',
values = my_chr,
mart=ensembl)
Usage
data(mouse_bm)
Format
An object of class data.frame with 55365 rows and 4 columns.
rhondabacher/methylscaper documentation built on April 18, 2023, 1:47 p.m.
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| mouse_bm | R Documentation |
Mouse gene symbols and positions
Description
library(biomaRt) #v2.44.4 ensembl <- useMart("ensembl") # GRCm39 ensembl <- useDataset("mmusculus_gene_ensembl",mart=ensembl) my_chr <- c(1:19, 'M', 'X', 'Y') mouse_bm <- getBM(attributes=c('chromosome_name', 'start_position', 'end_position', 'mgi_symbol'), filters = 'chromosome_name', values = my_chr, mart=ensembl)
Usage
data(mouse_bm)
Format
An object of class data.frame with 55365 rows and 4 columns.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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