reformatSCE: This is an internal function for now and a place-holder in...
In rhondabacher/methylscaper: Visualization of Methylation Data
reformatSCE R Documentation
This is an internal function for now and a place-holder
in case SingleCellExperiment may be
used in the future. We may need to update this later. Assumes
rownames are formatted like chr_pos and there are two assays.
The assay names are 'methylation_met' for endogenous methylation
and 'methylation_acc' for accessibility.
Description
This is an internal function for now and a place-holder
in case SingleCellExperiment may be
used in the future. We may need to update this later. Assumes
rownames are formatted like chr_pos and there are two assays.
The assay names are 'methylation_met' for endogenous methylation
and 'methylation_acc' for accessibility.
Usage
reformatSCE(dataIn)
Arguments
dataIn
Input SCE object passed to the prepSC() function.
Value
List object containing the met and acc tables.
rhondabacher/methylscaper documentation built on Oct. 10, 2024, 8:18 a.m.
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| reformatSCE | R Documentation |
This is an internal function for now and a place-holder in case SingleCellExperiment may be used in the future. We may need to update this later. Assumes rownames are formatted like chr_pos and there are two assays. The assay names are 'methylation_met' for endogenous methylation and 'methylation_acc' for accessibility.
Description
This is an internal function for now and a place-holder in case SingleCellExperiment may be used in the future. We may need to update this later. Assumes rownames are formatted like chr_pos and there are two assays. The assay names are 'methylation_met' for endogenous methylation and 'methylation_acc' for accessibility.
Usage
reformatSCE(dataIn)
Arguments
dataIn |
Input SCE object passed to the prepSC() function. |
Value
List object containing the met and acc tables.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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