Man pages for saezlab/CARNIVAL
A CAusal Reasoning tool for Network Identification (from gene expression data) using Integer VALue programming

AddPerturbationNode'AddPerturbationNode'
all_constraints_wLoop'all_constraints_wLoop'
assignPROGENyScores'assignPROGENyScores'
buildDataMatrix'buildDataMatrix'
create_variables_all'create_variables_all'
enrichCARNIVAL'enrichCARNIVAL'
exportResult'exportResult'
files2res'files2res'
generate_measfile'generate_measfile'
GeneSymbol2Uniprot'GeneSymbol2Uniprot'
load_CARNIVAL_examples'load_CARNIVAL_examples'
mapUniprotPKN'mapUniprotPKN'
runCARNIVAL'runCARNIVAL'
runDoRothEA'runDoRothEA'
runPROGENy'runPROGENy' This function is designed to compute progeny...
Uniprot2GeneSymbol'Uniprot2GeneSymbol'
write_binaries'write_binaries'
write_boundaries'write_boundaries'
write_constraints_1_all'write_constraints_1_all'
write_constraints_2_all'write_constraints_2_all'
write_constraints_3_all'write_constraints_3_all'
write_constraints_4_all'write_constraints_4_all'
write_constraints_5_all'write_constraints_5_all'
write_constraints_6'write_constraints_6'
write_constraints_7'write_constraints_7'
write_constraints_8'write_constraints_8'
write_constraints_objFunction_all'write_constraints_objFunction_all'
WriteDOTfig'WriteDOTfig'
write_generals'write_generals'
write_loop_constraints'write_loop_constraints'
writeLPFile'writeLPFile'
write_objective_function'write_objective_function'
write_objective_function_all'write_objective_function_all'
saezlab/CARNIVAL documentation built on July 20, 2019, 9:04 p.m.