writeParsedData: Saves all provided data together with generated variables for...

In saezlab/CARNIVAL: A CAusal Reasoning tool for Network Identification (from gene expression data) using Integer VALue programming

Saves all provided data together with generated variables for ILP problem in .RData file.

Description

Saves all provided data together with generated variables for ILP problem in .RData file.

Usage

writeParsedData(
  variables = variables,
  dataPreprocessed = dataPreprocessed,
  filename = "parsedData.RData"
)

Arguments

variables	list of nodes, edges and measurements variables generated by createLpFormulation_v2
dataPreprocessed	list containing preprocessed priorKnowledgeNetwork, measurements, weights (if provided), perturbations (if provided).
filename	filename of the parsed data file.

Value

filename of the parsed data file.

saezlab/CARNIVAL documentation built on Jan. 17, 2024, 5:10 p.m.