createInternalDataRepresentation: Creates internal data representation - variables for ILP...

In saezlab/CARNIVAL: A CAusal Reasoning tool for Network Identification (from gene expression data) using Integer VALue programming

Creates internal data representation - variables for ILP solvers, on the basis of provided preprocessed data.

Description

Creates internal data representation - variables for ILP solvers, on the basis of provided preprocessed data.

Usage

createInternalDataRepresentation(
  dataPreprocessed,
  newDataRepresentation = TRUE
)

Arguments

dataPreprocessed	list containing preprocessed priorKnowledgeNetwork, measurements, weights (if provided), perturbations (if provided).
newDataRepresentation	TRUE by default. For debugging with the old data representation, put to FALSE.

Value

variables for the new data representation or data vector (containing preprocessed information on measurement) and variables for the old data representation (CARNIVAL v.<2)

saezlab/CARNIVAL documentation built on Jan. 17, 2024, 5:10 p.m.