API for saezlab/decoupleR
decoupleR: Ensemble of computational methods to infer biological activities from omics data
| Global functions | |
|---|---|
| %>% | Man page |
| .check_quos_status | Source code |
| .data | Man page |
| .decoupler_mat_format | Man page |
| .decoupler_network_format | Man page |
| .extract_assay_auc | Source code |
| .fit_preprocessing | Man page Source code |
| .invoke_statistic | Source code |
| .label_expr | Source code |
| .mdt_analysis | Source code |
| .mdt_evaluate_model | Source code |
| .mlm_analysis | Source code |
| .ora_analysis | Source code |
| .ora_check_ns | Source code |
| .ora_contingency_table | Source code |
| .ora_fisher_exact_test | Source code |
| .ora_slice_targets | Source code |
| .select_statistics | Source code |
| .udt_analysis | Source code |
| .udt_evaluate_model | Source code |
| .ulm_analysis | Source code |
| .wmean_analysis | Source code |
| .wmean_calculate_weight | Source code |
| .wmean_evaluate_model | Source code |
| .wmean_map_model_data | Source code |
| .wmean_run | Source code |
| .wsum_analysis | Source code |
| .wsum_calculate_weight | Source code |
| .wsum_evaluate_model | Source code |
| .wsum_map_model_data | Source code |
| .wsum_run | Source code |
| .zscore_analysis | Source code |
| := | Man page |
| abort | Man page |
| as_label | Man page |
| as_name | Man page |
| check_corr | Man page Source code |
| convert_f_defaults | Man page Source code |
| decouple | Man page Source code |
| decoupleR | Man page |
| decoupleR-package | Man page |
| enquo | Man page |
| enquos | Man page |
| exec | Man page |
| expr | Man page |
| extract_sets | Man page Source code |
| filt_minsize | Man page Source code |
| get_collectri | Man page Source code |
| get_dorothea | Man page Source code |
| get_ksn_omnipath | Man page |
| get_profile_of | Man page Source code |
| get_progeny | Man page |
| get_resource | Man page |
| get_toy_data | Man page Source code |
| intersect_regulons | Man page Source code |
| mat_format | Man page |
| network_format | Man page |
| pivot_wider_profile | Man page Source code |
| quo_is_missing | Man page |
| quo_is_null | Man page |
| randomize_matrix | Man page Source code |
| rename_net | Man page Source code |
| run_aucell | Man page Source code |
| run_consensus | Man page Source code |
| run_fgsea | Man page Source code |
| run_gsva | Man page Source code |
| run_mdt | Man page Source code |
| run_mlm | Man page Source code |
| run_ora | Man page Source code |
| run_udt | Man page Source code |
| run_ulm | Man page Source code |
| run_viper | Man page Source code |
| run_wmean | Man page Source code |
| run_wsum | Man page Source code |
| run_zscore | Man page Source code |
| show_methods | Man page Source code |
| show_resources | Man page |
| sym | Man page |
| syms | Man page |
| tidyeval | Man page |
