satijalab/azimuth: A Shiny App Demonstrating a Query-Reference Mapping Algorithm for Single-Cell Data
Azimuth uses an annotated reference dataset to automate the processing, analysis, and interpretation of a new single-cell RNA-seq or ATAC-seq experiment. Azimuth leverages a 'reference-based mapping' pipeline that inputs a counts matrix and performs normalization, visualization, cell annotation, and differential expression (biomarker discovery).
Getting started
Browse package contents
Package details |
|
|---|---|
| Maintainer | |
| License | GPL-3 | file LICENSE |
| Version | 0.5.0 |
| URL | https://github.com/satijalab/azimuth |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
|
