PlottableMetadataNames: Return names of metadata columns in a Seurat object that have...

In satijalab/azimuth: A Shiny App Demonstrating a Query-Reference Mapping Algorithm for Single-Cell Data

Return names of metadata columns in a Seurat object that have an appropriate number of levels for plotting when converted to a factor

Description

Return names of metadata columns in a Seurat object that have an appropriate number of levels for plotting when converted to a factor

Usage

PlottableMetadataNames(object, exceptions, min.levels = 2, max.levels = 20)

Arguments

object	a Seurat object
exceptions	vector of metadata names to explicitly allow
min.levels	minimum number of levels in a metadata factor to include
max.levels	maximum number of levels in a metadata factor to include

satijalab/azimuth documentation built on Nov. 19, 2023, 8:34 a.m.