RenderDiffMotifExp: Prepare differential expression motif results for rendering

In satijalab/azimuth: A Shiny App Demonstrating a Query-Reference Mapping Algorithm for Single-Cell Data

Prepare differential expression motif results for rendering

Description

Prepare differential expression motif results for rendering

Usage

RenderDiffMotifExp(diff.exp, groups.use = NULL, n = 10L)

Arguments

diff.exp	A dataframe with differential expression results from Seurat::FindAllMarkers
groups.use	Names of groups to filter diff.exp to; groups must be found in diff.exp$cluster
n	Number of feature to filter diff.exp to per group

Value

diff.exp, ordered by adjusted p-value, filtered to n features per group in group.use

See Also

FindAllMarkers

satijalab/azimuth documentation built on Nov. 19, 2023, 8:34 a.m.