AzimuthData-class: AzimuthData
In satijalab/azimuth: A Shiny App Demonstrating a Query-Reference Mapping Algorithm for Single-Cell Data
AzimuthData-class R Documentation
AzimuthData
Description
The AzimuthData class is used to store reference info needed for Azimuth
Slots
plotrefDimReduc object containing UMAP for plotting and projection.
This should also contain the cell IDs in the misc slot
colormapVector of id-color mapping for specifying the plots.
seurat.versionVersion of Seurat used in reference construction
azimuth.versionVersion of Azimuth used in reference construction
reference.versionVersion of the Azimuth reference
satijalab/azimuth documentation built on Nov. 19, 2023, 8:34 a.m.
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| AzimuthData-class | R Documentation |
AzimuthData
Description
The AzimuthData class is used to store reference info needed for Azimuth
Slots
plotrefDimReduc object containing UMAP for plotting and projection. This should also contain the cell IDs in the misc slot
colormapVector of id-color mapping for specifying the plots.
seurat.versionVersion of Seurat used in reference construction
azimuth.versionVersion of Azimuth used in reference construction
reference.versionVersion of the Azimuth reference
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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