bamToFasta | Writes a BAM file to a file in FASTA format |
ehhR | A function to calculate EHH (Extended Haplotype Homozygosity)... |
ehhsR | A function to calculate EHHs (site Extended Haplotype... |
flogliksingle | A function to calculate loglikelihood of a single locus... |
ldR | A function to calculate Kelly's Zns statistic and the... |
nucdivR | A function to calculate the average hamming distance within... |
pileupFreq | Converts a pileup to a dataframe of nucleotide frequencies |
screen_bam | A function to identify sites of interestes from a list of... |
screen_bam_eff | An efficient function to identify sites of interestes from a... |
screen_bam_multi | An efficient function to identify sites of interestes from a... |
screen_fasta | A function to identify sites of interestes from a list of... |
screen_fasta_eff | A efficient function to identify sites of interestes from a... |
screen_select | A function to identify sites of interestes from a list of... |
sfsR | A function to calculate Tajima's D and Fay and WU's H... |
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