sfsR: A function to calculate Tajima's D and Fay and WU's H...
In sdwfrost/popseq: Population Analysis of Deep Sequencing Data

A function to calculate Tajima's D and Fay and WU's H statsitc given a haplotype matrix.

1	sfsR(hapmatrix)

hapmatrix

A haplotype matrix with ones (ancestral) and twos (derived).

Tajima's D and Fay and WU's H statsitc.

1
2
3

exmtx=matrix(sample(2,80,replace=T),ncol=10,nrow=8)
sfsR(exmtx)
sfsR(3-exmtx)

sdwfrost/popseq documentation built on May 29, 2019, 4:23 p.m.

sdwfrost/popseq index

README.md

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