bamToFasta: Writes a BAM file to a file in FASTA format

Description Usage Arguments Author(s)

View source: R/bamToFasta.R

Description

bamToFasta converts a BAM file to a FASTA file.

Usage

1
bamToFasta(bf, fn, region = NULL)

Arguments

bf

a BamFile

fn

the filename for the FASTA file

region

an optional region from the BAM file (as a GRanges object)

Author(s)

Simon Frost ([email protected])


sdwfrost/popseq documentation built on May 29, 2019, 4:23 p.m.