stat_plot_subgroups: Plot averaged signature exposures per subgroup

In slw287r/yapsa: Yet Another Package for Signature Analysis

Description

Plot one averaged signature exposure pattern per subgroup. Uses split_exposures_by_subgroups.

Usage

stat_plot_subgroups(
  in_exposures_df,
  in_subgroups_df,
  in_signatures_ind_df,
  in_subgroups.field = "subgroup",
  in_PID.field = "PID",
  in_colour_vector = NULL
)

Arguments

in_exposures_df	Numerical data frame of the exposures (i.e. contributions of the different signatures to the number of point mutations per PID)
in_subgroups_df	Data frame indicating which PID belongs to which subgroup
in_signatures_ind_df	Data frame carrying additional information on the signatures
in_subgroups.field	Name indicating which column in in_subgroups_df contains the subgroup information
in_PID.field	Name indicating which column in in_subgroups_df contains the PID information
in_colour_vector	If non-null, specifies the colours attributed to the subgroups

Value

The function doesn't return any value, it plots instead.

See Also

split_exposures_by_subgroups

Examples

 NULL

slw287r/yapsa documentation built on June 7, 2020, 12:46 a.m.