testSigs: Test for significance of alternative models cohort wide

Description Usage Arguments Value Examples

View source: R/confidence.R

Description

Wrapper function for variateExpSingle for application cohort wide.

Usage

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testSigs(
  in_catalogue_df,
  in_sig_df,
  in_exposures_df,
  in_factor = 0,
  in_pdf = NULL
)

Arguments

in_catalogue_df

Input numerical data frame of the mutational catalog of the cohort to be analyzed

in_sig_df

Numerical data frame of the signatures used for analysis.

in_exposures_df

Input numerical data frame of the exposures computed for the cohort to be analyzed

in_factor

Deviation factor of the altered alternative model.

in_pdf

Probability distribution function, parameter passed on to confIntExp if NULL assumed to be normal distribution.

Value

Returns a data frame

Examples

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slw287r/yapsa documentation built on June 7, 2020, 12:46 a.m.