Files in soedinglab/merlot
MERLoT

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
Dependencies
LICENSE.md
NAMESPACE
R/ElasticPrincipalTree.R R/GeneSelection.R R/PlotTree.R R/Pseudotime.R R/ReadDataset.R R/ScaffoldTree.R R/StatisticalTests.R README.md
WikiImages/Elastic.png
WikiImages/Flattened.png
WikiImages/GeneProfile.png
WikiImages/Pseudotime.png
WikiImages/Scaffold.png
WikiImages/Scaffold1.png
WikiImages/Scaffold2.png
drawing.svg
inst/example/Example.R inst/example/ExampleGuo2010.R inst/example/ExampleGuo20102D.R inst/example/ExamplePaul2015.R inst/example/ExampleTreutlein2014.R inst/example/ExampleVelten2017.R
inst/example/Guo2010.txt
inst/example/GuoFeatures.txt
inst/example/GuoRotatedCoordinates.txt
inst/example/Paul2015.txt
inst/example/PaulCellsMapping.csv
inst/example/STEMNETCoords.txt
inst/example/Treutlein2014.txt
inst/example/Velten2017.txt
inst/example/VeltenCellTypes.txt
inst/python/ScaffoldTree.py
man/CalculateElasticTree.Rd man/CalculateElasticTreeConstrained.Rd man/CalculatePseudotimes.Rd man/CalculateScaffoldTree.Rd man/DuplicateTreeNodes.Rd man/GenesSpaceEmbedding.Rd man/GetGeneCorrelationNetwork.Rd man/GetTrajectory.Rd man/LoadExprMatrix.Rd man/ReadDataset.Rd man/branch_differential_expression.Rd man/plot_elastic_tree.Rd man/plot_flattened_tree.Rd man/plot_flattened_tree_gene_expression.Rd man/plot_gene_on_map.Rd man/plot_heatmaps_embedding.Rd man/plot_pseudotime_expression_gene.Rd man/plot_pseudotimes.Rd man/plot_scaffold_tree.Rd man/seurat_normalize.Rd man/seurat_variable_genes.Rd man/subpopulations_differential_expression.Rd
merlot.Rproj
soedinglab/merlot documentation built on Aug. 11, 2018, 12:03 p.m.