Given an Elastic Tree it plots a 2 dimensional version of the Elastic Tree. If given annotation for each cell, each node of the elastic tree will be a pie chart of the different cell identities that were assigned to the node.
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ElasticTree |
One of the elements in the Dataset$GeneNames object. |
cell_annot |
Cell annotation to show in the nodes of the elastic tree. Default is the MERLoT branch identity. |
layout |
Layout for the visualization of the elastic tree. Default is to use the Kamada-Kawai algorithm. |
legend_position |
The position of the legend. |
node_size |
If annotation was provided, set if the size of each pie chart will be uniform ("topology") or depend on the number of cells assigned to the node ("cells") |
node_radius |
Sets the default node radius if |
cols |
A vector of colors to use for the annotation. |
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