Description Usage Arguments Value
View source: R/StatisticalTests.R
Given an gene expression matrix (raw or embedded in the high dimensional elastic tree) it calculates the correlations in between all pairs of gene expression profiles and plots the network
1 2 | GetGeneCorrelationNetwork(ExpressionMatrix, cor_threshold = 0.4,
plot = T)
|
ExpressionMatrix |
contaings the expression profiles(columns) along the cells (rows) |
cor_threshold |
correlation threshold for showing edges in the network plot (default=0.4) |
plot |
whether the network should be plotted or not (default=T) |
cor.genes pair correlation matrix
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