GetGeneCorrelationNetwork: Get Gene Correlation Network
In soedinglab/merlot: MERLoT
Description
Usage
Arguments
Value
View source: R/StatisticalTests.R
Description
Given an gene expression matrix (raw or embedded in the high dimensional elastic tree) it calculates the correlations in between all pairs of gene expression profiles and plots the network
Usage
1
2
GetGeneCorrelationNetwork(ExpressionMatrix, cor_threshold = 0.4,
plot = T)
Arguments
ExpressionMatrix
contaings the expression profiles(columns) along the cells (rows)
cor_threshold
correlation threshold for showing edges in the network plot (default=0.4)
plot
whether the network should be plotted or not (default=T)
Value
cor.genes pair correlation matrix
soedinglab/merlot documentation built on June 28, 2020, 9:36 a.m.
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Description Usage Arguments Value
View source: R/StatisticalTests.R
Description
Given an gene expression matrix (raw or embedded in the high dimensional elastic tree) it calculates the correlations in between all pairs of gene expression profiles and plots the network
Usage
1 2 | GetGeneCorrelationNetwork(ExpressionMatrix, cor_threshold = 0.4,
plot = T)
|
Arguments
ExpressionMatrix |
contaings the expression profiles(columns) along the cells (rows) |
cor_threshold |
correlation threshold for showing edges in the network plot (default=0.4) |
plot |
whether the network should be plotted or not (default=T) |
Value
cor.genes pair correlation matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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