Plot Gene Expression Profile as a function of pseudotime
1 2 3 | plot_pseudotime_expression_gene(GeneName, EmbeddedTree, Pseudotimes,
selectedcolors = grDevices::rainbow(length(Pseudotimes$Branches)),
branch_tags = c(), addlegend = F, range_y = "tree")
|
GeneName |
an element from the Datasets$GeneNames object. |
EmbeddedTree |
High dimensional principal elastic tree. |
Pseudotimes |
object calculated by CalculatePseudotimes() |
selectedcolors |
The colors to use for the branches |
branch_tags |
The tags to use for the branches |
addlegend |
Whether or not to add a legend |
range_y |
Must be either "cells" or "tree" |
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