INSPEcT: INSPEcT package

In ste-depo/INSPEcT: Modeling RNA synthesis, processing and degradation with RNA-seq data

Description

INSPEcT (INference of Synthesis, Processing and dEgradation rates from Transcriptomic data), is a package that analyse RNA-seq data in order to evaluate synthesis, processing and degradation rates and asses via modeling the rates that determines changes in RNA levels.

To see how the typical workflow of INSPEcT works, type:
vignette('INSPEcT')

INSPEcT implements two main classes (INSPEcT and INSPEcT_diffsteady) and their corresponding methods. To have a detailed description of how the two classes are structured and which methods apply on, type:

?'INSPEcT-class'
?'INSPEcT_diffsteady-class'

To obtain the citation, type:
citation('INSPEcT')

ste-depo/INSPEcT documentation built on Oct. 3, 2020, 9:14 p.m.