plotPMgene: Plot the premature/mature expression of a gene and the global...

In ste-depo/INSPEcT: Modeling RNA synthesis, processing and degradation with RNA-seq data

Description

Plot the premature and mature expressions of a specific gene in the different samples of the dataset along with the null model and the log2 fold change threshold. Individal observations that fall outside of the dashed lines are considered post-transcriptional events.

Usage

plotPMgene(object, gene_id, samples_colors = 1)

## S4 method for signature 'INSPEcT_steadyNoNascent'
plotPMgene(object, gene_id, samples_colors = 1)

Arguments

object	An object of class INSPEcT_steadyNoNascent
gene_id	A numeric that indicated the index of the gene to be plotted
samples_colors	The color code relative to the samples

ste-depo/INSPEcT documentation built on Oct. 3, 2020, 9:14 p.m.