Calculate modeled rates and concentrations
This function is used to evaluate rates and concentrations after modeling of the
rates has been run with
modelRates. The modeled rates are in functional
form and can be evaluated at any time points.
This method can be used to regenerate the rates assiciated to the modeling, in case some testing parameters has changed.
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An object of class INSPEcT_model
additional arguments tpts : A vector of time points where rates and concentrations have to be evaluated
An object of class ExpressionSet containing the modeled rates and concentrations
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data('nascentInspObj10', package='INSPEcT') tpts <- nascentInspObj10@tpts eSet <- makeModelRates(getModel(nascentInspObj10), tpts=tpts) exprs(eSet) data('nascentInspObj10', package='INSPEcT') viewModelRates(nascentInspObj10, 'degradation') ## force every degradation rate to be accepted as variable thresholds(getModel(nascentInspObj10))$brown <- c(synthesis=.01, degradation=1, processing=.01) nascentInspObj10 <- makeModelRates(nascentInspObj10) viewModelRates(nascentInspObj10, 'degradation')
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