Seurat_FindAllMarkers-methods: description of function Seurat_FindAllMarkers
In stela2502/BioData: The package allows to annotate a numeric data.table with col and row data
Description
Use Seurat's FindAllMarkers function
Usage
1
Seurat_FindAllMarkers(x, condition, logfc.threshold = 1, minPct = 0.1)
Arguments
x
the BioData object
condition
The grouping you wat to analyze
logfc.threshold
test only genes with a liog fold change of default=1.0 or more
minPct
test only genes with expression in more than default=0.1 fraction of cells in at least one group
stela2502/BioData documentation built on Feb. 23, 2022, 5:47 a.m.
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Description
Use Seurat's FindAllMarkers function
Usage
1 | Seurat_FindAllMarkers(x, condition, logfc.threshold = 1, minPct = 0.1)
|
Arguments
x |
the BioData object |
condition |
The grouping you wat to analyze |
logfc.threshold |
test only genes with a liog fold change of default=1.0 or more |
minPct |
test only genes with expression in more than default=0.1 fraction of cells in at least one group |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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