ggplot.gene-methods: description of function ggplot.gene

ggplot.geneR Documentation

description of function ggplot.gene

Description

Plot one gene in the StefansExpressionSet as boxplot or points plot (using ggplot2)

Usage

ggplot.gene(dat, gene, colrs = NULL, groupCol = "GroupID", colCol = NULL,
  boxplot = F, log2 = F)

Arguments

dat

the StefansExpressionSet object

gene

the gene of interest

colrs

the grouping colors for the x axis (samples)

groupCol

the samples clumn that contains the grouping information

colCol

the sample column that contains the color information

log2

log2 transform data before plotting (default = F)


stela2502/StefansExpressionSet documentation built on April 24, 2023, 8:15 p.m.