gsa-mouse: Gene Set Analysis, mouse dataset results

gsa-mouseR Documentation

Gene Set Analysis, mouse dataset results

Description

Results for case study on gene set analysis using mouse dataset described in Korthauer and Kimes et al. (2019). Analyses were performed using GSEA.

Arguments

metadata

logical whether to load metadata (TRUE) or full resource (FALSE). (default = FALSE)

Details

Results for this case study include:

  • mouse-benchmark: using gene set size as covariate.

  • mouse-uninf-benchmark: using uninformative covariate.

See Also

gsa-human

Examples

`mouse-benchmark`(metadata = TRUE)

## Not run: 
`mouse-benchmark`()
`mouse-uninf-benchmark`()

## End(Not run)


stephaniehicks/benchmarkfdrData2019 documentation built on April 13, 2025, 9:02 p.m.