scrnaseq-human: scRNA-seq, human dataset results

Description Arguments Details See Also Examples

Description

Results for case study on single-cell RNA-seq differential expression analysis using data from diffuse neoplastic infiltrating cells at the migrating front of human glioblastoma as described in Korthauer and Kimes et al. (2019). Differential expression was testing using either the MAST package, scDD package, or Wilcoxon rank-sum test.

Arguments

metadata

logical whether to load metadata (TRUE) or full resource (FALSE). (default = FALSE)

Details

Results for this case study include:

See Also

scrnaseq-mouse

Examples

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`human-benchmark-mast-det`(metadata = TRUE)

## Not run: 
`human-benchmark-mast-det`()
`human-benchmark-mast-mean`()
`human-benchmark-mast-uninf`()
`human-benchmark-scdd-det`()
`human-benchmark-scdd-mean`()
`human-benchmark-scdd-uninf`()
`human-benchmark-wilcox-det`()
`human-benchmark-wilcox-mean`()
`human-benchmark-wilcox-uninf`()

## End(Not run)

stephaniehicks/benchmarkfdrData2019 documentation built on June 20, 2021, 10 a.m.