Man pages for stephaniehicks/methylCC
Estimate the cell composition of whole blood in DNA methylation samples

cellcountscellcounts
celltypeSpecificDMRegionsCelltype specific differentially methylated regions
estimateCCestimateCC
estimateCC-classestimateCC
initialize_thetainitialize_theta
methylCC_EStepExpectation step
methylCC_MStepMaximization step
offMethRegionsUnmethylated regions for all celltypes
onMethRegionsMethylated regions for all celltypes
pickTargetPositionspickTargetPositions
preProcessEstCountsSeqpreProcessEstCountsSeq
summarysummary
WFunHelper function to take the product of Z and cell composition...
stephaniehicks/methylCC documentation built on Nov. 18, 2017, 10:15 p.m.