RCS_example: ReadCountSet object example

In sunlightwang/SeqGSEA: Gene Set Enrichment Analysis (GSEA) of RNA-Seq Data: integrating differential expression and splicing

Description

An exemplified ReadCountSet object to demonstrate functions in the SeqGSEA package. This object is comprised of 20 samples across 5,000 exons, a part of the prostate cancer RNA-Seq data set from Kannan et al (2011). Please note that the count data in this example object is incomplete.

Usage

data("RCS_example")

References

Kannan, K., Wang, L., Wang, J., Ittmann, M. M., Li, W., and Yen, L. (2001). Recurrent chimeric RNAs enriched in human prostate cancer identified by deep sequencing. Proc Natl Acad Sci USA, 108(22): 9172-7.

sunlightwang/SeqGSEA documentation built on Dec. 5, 2020, 5:52 p.m.