svalvaro/MQmetrics: Quality Control of Protemics Data

The package MQmetrics (MaxQuant metrics) provides a workflow to analyze the quality and reproducibility of your proteomics mass spectrometry analysis from MaxQuant.Input data are extracted from several MaxQuant output tables and produces a pdf report. It includes several visualization tools to check numerous parameters regarding the quality of the runs. It also includes two functions to visualize the iRT peptides from Biognosys in case they were spiked in the samples.

Getting started

Package details

Bioconductor views DataImport Infrastructure MassSpectrometry Proteomics QualityControl
Maintainer
LicenseGPL-3
Version1.3.3
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("svalvaro/MQmetrics")
svalvaro/MQmetrics documentation built on Jan. 14, 2022, 6:36 p.m.