knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>"
)
knitr::opts_knit$set(root.dir = "..")

This vignette describes how Taxonomically Informed Metabolite Annotation is performed. If you followed all previous steps successfully, this should be a piece of cake, you deserve it!

library("timaR")
source(file = "inst/scripts/weight_annotations.R")

The final exported file is formatted in order to be easily imported in Cytoscape to further explore your data!

We hope you enjoyed using TIMA and are pleased to hear from you!

For any remark or suggestion, please fill an issue or feel free to contact us directly.



taxonomicallyinformedannotation/tima-r documentation built on July 17, 2024, 7:11 p.m.