API for taylo5jm/interactions
Classification of gene expression profile sets generated from combination stimuli
| Global functions | |
|---|---|
| Interaction-class | Man page |
| allDrugCombinations | Man page |
| allModes | Man page |
| asCountsMatrix | Man page |
| classifyByThOutcomeVector | Man page |
| codeEdgeROutcomeVectors | Man page |
| codeLimmaOutcomeVectors | Man page |
| codeOVElement | Man page |
| colorBarplot | Man page |
| comboExists | Man page |
| comboIndices | Man page |
| designColnames | Man page |
| designMatrixAndContrasts | Man page |
| dge2voom_q | Man page |
| edgeRModeClassifier | Man page |
| enumerateThOutcomeVectors | Man page |
| estimateAllGLMDisp | Man page |
| filterMetadata | Man page |
| getCondition | Man page |
| getExpectedCounts | Man page |
| getGOTable | Man page |
| getGOTermsForAllModes | Man page |
| getGOTermsForModes | Man page |
| getGeneMetadata | Man page |
| getGeneVector | Man page |
| getIntClass | Man page |
| getInteraction | Man page |
| getPCAScores | Man page |
| getVehicles | Man page |
| glmFitAndLRT | Man page |
| initInteraction | Man page |
| interactionDistTable | Man page |
| interactionGeneTable | Man page |
| interactionModeClassifier | Man page |
| isAnomaly | Man page |
| isMode | Man page |
| isNi | Man page |
| isValidCombination | Man page |
| limmaModeClassifier | Man page |
| massageCounts | Man page |
| modeClassification | Man page |
| multiplot | Man page |
| niCheck | Man page |
| outcomeVectorsByMode | Man page |
| ovTable | Man page |
| partitionData | Man page |
| pcaScatterMatrix | Man page |
| poolInteractionGenes | Man page |
| qplotOutcomeVectorDist | Man page |
| rankTuples | Man page |
| reportModeClassStats | Man page |
| reportnAnomaly | Man page |
| reportnInteractions | Man page |
| reportnNI | Man page |
| saveTopGoRes | Man page |
| sharedGenesTable | Man page |
| sitt | Man page Man page |
| sitt-package | Man page Man page |
| stringCoerce | Man page |
| trainKNN | Man page |
| treatmentConcTable | Man page |
| tuneClassifier | Man page |
| uniqueBatches | Man page |
